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Aliases : DTF2, SHH2
Description : RNA polymerase-IV-positioning factor *(SHH). SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex
Gene families : OG0010595 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra037587 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_173 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004609 | phosphatidylserine decarboxylase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005096 | GTPase activator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008047 | enzyme activator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019321 | pentose metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019566 | arabinose metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046373 | L-arabinose metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032001 | SAWADEE_dom | 140 | 267 |
| No external refs found! |