Bra037130 (LOS6, NPQ2, ZEP,...)

Aliases : LOS6, NPQ2, ZEP, ABA1, ATABA1, ATZEP, IBS3

Description : germ cell differentiation factor *(RKD). RKD-type transcription factor. EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen. zeaxanthin epoxidase *(ZEP). zeaxanthin epoxidase *(ABA1). zeaxanthin epoxidase *(ZEP)

Gene families : OG0007918 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra037130
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_91

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	None	Extended
MF	GO:0071949	FAD binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000725	recombinational repair	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004356	glutamine synthetase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006310	DNA recombination	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006542	glutamine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016211	ammonia ligase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002938	FAD-bd	350	392
IPR003035	RWP-RK_dom	778	824
IPR000253	FHA_dom	545	621

External Links

No external refs found!

Bra037130 (LOS6, NPQ2, ZEP,...)

Expression Profile

Co-expression Networks

Functional Annotation