Bra035808 (AtGGPS8, PPPS2)

Aliases : AtGGPS8, PPPS2

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group. isoprenyl diphosphate synthase *(IDS)

Gene families : OG0011082 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra035808
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_66

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	IEA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008430	selenium binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030570	pectate lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000092	Polyprenyl_synt	85	319

External Links

No external refs found!

Bra035808 (AtGGPS8, PPPS2)

Expression Profile

Co-expression Networks

Functional Annotation