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  5. Bra035800

Bra035800 (APUM5, PUM5)


Aliases : APUM5, PUM5

Description : not classified


Gene families : OG0006401 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra035800
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_240


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000272 polysaccharide catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004484 mRNA guanylyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006370 7-methylguanosine mRNA capping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006537 glutamate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008192 RNA guanylyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009452 7-methylguanosine RNA capping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015930 glutamate synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070568 guanylyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 610 644
IPR001313 Pumilio_RNA-bd_rpt 793 824
IPR001313 Pumilio_RNA-bd_rpt 869 900
IPR001313 Pumilio_RNA-bd_rpt 724 741
IPR001313 Pumilio_RNA-bd_rpt 827 861
IPR001313 Pumilio_RNA-bd_rpt 754 789
IPR001313 Pumilio_RNA-bd_rpt 649 679
IPR001313 Pumilio_RNA-bd_rpt 682 715
No external refs found!