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Aliases : SYP52, ATSYP52
Description : Qc-type SYP5-group component of SNARE membrane fusion complex
Gene families : OG0004407 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004407_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra035128 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_117 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015858 | nucleoside transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019899 | enzyme binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030117 | membrane coat | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000727 | T_SNARE_dom | 173 | 224 |
| No external refs found! |