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  5. Bra035023

Bra035023 (OSU1, TSD2, QUA2)


Aliases : OSU1, TSD2, QUA2

Description : pectin methyltransferase *(QUA2) involved in pectin-dependent cell adhesion


Gene families : OG0004375 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra035023
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Bra008353 OSU1, TSD2, QUA2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009536 plastid IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046422 violaxanthin de-epoxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 149 650
No external refs found!