1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra034840

Bra034840 (MEF10)


Aliases : MEF10

Description : RNA editing factor *(MEF10)


Gene families : OG0020603 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra034840
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_3


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006013 mannose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019318 hexose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 434 496
IPR002885 Pentatricopeptide_rpt 318 363
IPR002885 Pentatricopeptide_rpt 217 263
IPR032867 DYW_dom 548 618
IPR002885 Pentatricopeptide_rpt 391 415
IPR002885 Pentatricopeptide_rpt 291 315
IPR002885 Pentatricopeptide_rpt 117 146
IPR002885 Pentatricopeptide_rpt 78 108
No external refs found!