Bra034662

Description : not classified

Gene families : OG0006970 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra034662

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008168	methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009112	nucleobase metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046112	nucleobase biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	65	243
IPR001650	Helicase_C	281	425

External Links

No external refs found!

Bra034662

Expression Profile

Co-expression Networks

Functional Annotation