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  5. Bra003459

Bra003459 (POB1, ATPOB1, AHT1, LRB2)


Aliases : POB1, ATPOB1, AHT1, LRB2

Description : substrate adaptor *(LRB) of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG0003987 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra003459
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_202

Target Alias Description ECC score Gene Family Method Actions
Bra004551 LRB1 substrate adaptor *(LRB) of CUL3-BTB E3 ubiquitin ligase complex 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006904 vesicle docking involved in exocytosis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022406 membrane docking IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048278 vesicle docking IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051259 protein complex oligomerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051260 protein homooligomerization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051640 organelle localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Brassica rapa GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140029 exocytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140056 organelle localization by membrane tethering IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 143 239
IPR011705 BACK 265 357
No external refs found!