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Description : not classified
Gene families : OG0014407 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra034550 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_256 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source | |
|---|---|---|---|---|---|
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods | |
| BP | GO:0006508 | proteolysis | IEP | Brassica rapa GO terms from Neighborhoods | |
| MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods | |
| MF | IEP | GO:0008233 | peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods | |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods | |
| BP | GO:0016579 | protein deubiquitination | IEP | Brassica rapa GO terms from Neighborhoods | |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods | |
| MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods | |
| BP | GO:0042546 | cell wall biogenesis | IEP | Brassica rapa GO terms from Neighborhoods | |
| BP | GO:0043687 | post-translational protein modification | IEP | Brassica rapa GO terms from Neighborhoods | |
| BP | GO:0044085 | cellular component biogenesis | IEP | Brassica rapa GO terms from Neighborhoods | |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Brassica rapa GO terms from Neighborhoods | |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Brassica rapa GO terms from Neighborhoods | |
| MF | GO:0101005 | deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 751 | 775 |
| IPR002885 | Pentatricopeptide_rpt | 450 | 470 |
| IPR002885 | Pentatricopeptide_rpt | 190 | 215 |
| IPR002885 | Pentatricopeptide_rpt | 477 | 506 |
| IPR002885 | Pentatricopeptide_rpt | 83 | 109 |
| IPR046848 | E_motif | 796 | 856 |
| IPR032867 | DYW_dom | 892 | 984 |
| IPR002885 | Pentatricopeptide_rpt | 677 | 724 |
| IPR002885 | Pentatricopeptide_rpt | 378 | 423 |
| IPR002885 | Pentatricopeptide_rpt | 575 | 621 |
| No external refs found! |