Bra034385 (ABCG3)

Aliases : ABCG3

Description : not classified

Gene families : OG0007859 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra034385
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_29

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004640	phosphoribosylanthranilate isomerase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006568	tryptophan metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006576	biogenic amine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006586	indolalkylamine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009072	aromatic amino acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009314	response to radiation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009416	response to light stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009581	detection of external stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009582	detection of abiotic stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009583	detection of light stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009584	detection of visible light	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042430	indole-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051606	detection of stimulus	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013525	ABC2_TM	415	625
IPR003439	ABC_transporter-like_ATP-bd	146	280

External Links

No external refs found!

Bra034385 (ABCG3)

Expression Profile

Co-expression Networks

Functional Annotation