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  5. Bra003304

Bra003304


Description : not classified


Gene families : OG0025198 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra003304
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_80


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005685 U1 snRNP IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005778 peroxisomal membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006376 mRNA splice site recognition IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007031 peroxisome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015020 glucuronosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031903 microbody membrane IEP Brassica rapa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000467 G_patch_dom 99 141
IPR025239 DUF4187 219 272
No external refs found!