Bra032908 (RLT1, HB-1)


Aliases : RLT1, HB-1

Description : component *(RINGLET/RLT) of ISWI chromatin remodeling complex


Gene families : OG0007957 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra032908
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_91


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009314 response to radiation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009416 response to light stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009581 detection of external stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009582 detection of abiotic stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009583 detection of light stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009584 detection of visible light IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051606 detection of stimulus IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018501 DDT_dom 538 593
IPR028941 WHIM2_dom 1067 1139
IPR001356 Homeobox_dom 39 95
IPR007759 Asxl_HARE-HTH 719 787
IPR028942 WHIM1_dom 917 958
No external refs found!