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  5. Bra031986

Bra031986 (MEF26)


Aliases : MEF26

Description : RNA editing factor *(MEF26)


Gene families : OG0006671 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra031986
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_6


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006308 DNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048364 root development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048731 system development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032867 DYW_dom 785 878
IPR002885 Pentatricopeptide_rpt 67 114
IPR002885 Pentatricopeptide_rpt 168 215
IPR046848 E_motif 689 749
IPR002885 Pentatricopeptide_rpt 571 598
IPR002885 Pentatricopeptide_rpt 543 569
IPR002885 Pentatricopeptide_rpt 470 500
IPR002885 Pentatricopeptide_rpt 442 467
IPR002885 Pentatricopeptide_rpt 372 399
IPR002885 Pentatricopeptide_rpt 344 369
IPR002885 Pentatricopeptide_rpt 272 296
IPR002885 Pentatricopeptide_rpt 142 167
IPR002885 Pentatricopeptide_rpt 244 269
IPR002885 Pentatricopeptide_rpt 608 635
No external refs found!