Bra031871 (TGA1)

Aliases : TGA1

Description : TGA-type transcription factor

Gene families : OG0004383 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004383_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra031871
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_217

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004096	catalase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005102	signaling receptor binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006631	fatty acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008083	growth factor activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008283	cell population proliferation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030545	signaling receptor regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030546	signaling receptor activator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044242	cellular lipid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0048018	receptor ligand activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004827	bZIP	84	114
IPR025422	TGA_domain	172	247

External Links

No external refs found!

Bra031871 (TGA1)

Expression Profile

Co-expression Networks

Functional Annotation