Bra031529 (CNGC20, ATCNGC20, CNBT1)

Aliases : CNGC20, ATCNGC20, CNBT1

Description : cyclic nucleotide-gated cation channel *(CNGC)

Gene families : OG0000890 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000890_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra031529
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_68

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bra022233	ATCNGC19, CNGC19	cyclic nucleotide-gated cation channel *(CNGC)	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra029958	ATCNGC19, CNGC19	cyclic nucleotide-gated cation channel *(CNGC)	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004620	phospholipase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004629	phospholipase C activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016298	lipase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	209	563

External Links

No external refs found!