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  5. Bra031328

Bra031328 (PAC1)


Aliases : PAC1

Description : EC_3.4 hydrolase acting on peptide bond (peptidase). alpha-type-3 component *(PAC) of 26S proteasome


Gene families : OG0006228 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra031328
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_141


Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004181 metallocarboxypeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004559 alpha-mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006505 GPI anchor metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006506 GPI anchor biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006650 glycerophospholipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006664 glycolipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008235 metalloexopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008484 sulfuric ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009247 glycolipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045017 glycerolipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046467 membrane lipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046474 glycerophospholipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:1903509 liposaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 5 27
IPR001353 Proteasome_sua/b 30 214
No external refs found!