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  5. Bra031265

Bra031265 (4CL5)


Aliases : 4CL5

Description : p-coumarate:CoA ligase *(4CL). EC_6.2 ligase forming carbon-sulfur bond. p-coumarate:CoA ligase *(4CL)


Gene families : OG0002693 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra031265
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_1


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008417 fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 57 457
IPR025110 AMP-bd_C 466 541
No external refs found!