Bra031010 (PAPS1)


Aliases : PAPS1

Description : poly(A) RNA polymerase


Gene families : OG0004617 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004617_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra031010
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_119


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004652 obsolete polynucleotide adenylyltransferase activity IEA Interproscan
BP GO:0043631 obsolete RNA polyadenylation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004484 mRNA guanylyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005247 voltage-gated chloride channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005253 monoatomic anion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005254 chloride channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005484 SNAP receptor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006370 7-methylguanosine mRNA capping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006821 chloride transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008192 RNA guanylyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009452 7-methylguanosine RNA capping IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015108 chloride transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022832 voltage-gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070568 guanylyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990316 Atg1/ULK1 kinase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007012 PolA_pol_cen_dom 12 335
IPR007010 PolA_pol_RNA-bd_dom 338 396
No external refs found!