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  5. Bra030945

Bra030945 (PPC1, ATPEPC1, PEPC1, ATPPC1)


Aliases : PPC1, ATPEPC1, PEPC1, ATPPC1

Description : PEP carboxylase *(PPC). EC_4.1 carbon-carbon lyase


Gene families : OG0001931 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra030945
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_166


Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045132 meiotic chromosome segregation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070569 uridylyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1903046 meiotic cell cycle process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR021135 PEP_COase 36 964
No external refs found!