1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra030575

Bra030575 (PUB59, MAC3A)


Aliases : PUB59, MAC3A

Description : component *(MAC3) of MAC spliceosome-associated complex. E3 ubiquitin protein ligase *(PUB60)


Gene families : OG0004010 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra030575
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_31


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_rpt 448 478
IPR001680 WD40_rpt 272 308
IPR001680 WD40_rpt 358 393
IPR001680 WD40_rpt 225 262
IPR013915 Pre-mRNA_splic_Prp19 76 101
No external refs found!