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  5. Bra030350

Bra030350 (EMB2744)


Aliases : EMB2744

Description : not classified


Gene families : OG0012010 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra030350
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_80


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032259 methylation IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 303 351
IPR002885 Pentatricopeptide_rpt 405 452
IPR046848 E_motif 526 583
IPR002885 Pentatricopeptide_rpt 379 401
IPR002885 Pentatricopeptide_rpt 480 502
IPR002885 Pentatricopeptide_rpt 70 97
IPR002885 Pentatricopeptide_rpt 98 127
IPR032867 DYW_dom 620 712
No external refs found!