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  5. Bra030057

Bra030057 (ATU2AF35A)


Aliases : ATU2AF35A

Description : small subunit of U2AF pre-RNA splicing auxiliary factor complex


Gene families : OG0003075 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra030057
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_645


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 109 132
IPR000571 Znf_CCCH 27 51
No external refs found!