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  5. Bra029980

Bra029980 (GH43B)


Aliases : GH43B

Description : beta-1,3-galactosidase *(GH43)


Gene families : OG0003053 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra029980
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Bra024441 GH43A beta-1,3-galactosidase *(GH43) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015299 obsolete solute:proton antiporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006710 Glyco_hydro_43 176 365
No external refs found!