Description : EC_4.2 carbon-oxygen lyase. pectate lyase
Gene families : OG0001982 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001982_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra029614 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_147 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006090 | pyruvate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006096 | glycolytic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006281 | DNA repair | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006284 | base-excision repair | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0007165 | signal transduction | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016052 | carbohydrate catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Brassica rapa GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 251 | 322 |
No external refs found! |