Bra029614


Description : EC_4.2 carbon-oxygen lyase. pectate lyase


Gene families : OG0001982 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001982_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra029614
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_147


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002022 Pec_lyase 251 322
No external refs found!