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  5. Bra029550

Bra029550


Description : contact site modulator (VST) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0028688 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra029550
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_17


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000775 chromosome, centromeric region IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007049 cell cycle IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000535 MSP_dom 93 203
No external refs found!