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Aliases : PCFS4
Description : component *(Pcf11) of Cleavage Factor II (CF-IIm) complex
Gene families : OG0015118 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra029526 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_117 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0000776 | kinetochore | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0044036GO:0004386 | helicase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005801 | cis-Golgi network | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006996 | organelle organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015923 | mannosidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0018024 | obsolete histone lysine N-methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022618 | protein-RNA complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030127 | COPII vesicle coat | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031267 | small GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034508 | centromere complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0035145 | exon-exon junction complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043130 | ubiquitin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051020 | GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071826 | protein-RNA complex organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0099080 | supramolecular complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006569 | CID_dom | 72 | 173 |
| No external refs found! |