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  5. Bra029391

Bra029391 (SQP2)


Aliases : SQP2

Description : squalene epoxidase. EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen


Gene families : OG0001146 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra029391
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Bra009738 SQP1, SQE5 squalene epoxidase. EC_1.14 oxidoreductase acting on... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004506 squalene monooxygenase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006076 FAD-dep_OxRdtase 47 77
IPR013698 Squalene_epoxidase 197 473
No external refs found!