Bra029081

Description : not classified

Gene families : OG0001570 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001570_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra029081
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_191

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bra029050	No alias	not classified	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005759	mitochondrial matrix	IEA	Interproscan
CC	GO:0031974	membrane-enclosed lumen	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0051920	peroxiredoxin activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003428	MAM33	62	227

External Links

No external refs found!