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  5. Bra002888

Bra002888 (RRP6L3, AtRRP6L3)


Aliases : RRP6L3, AtRRP6L3

Description : exoribonuclease *(RRP6L)


Gene families : OG0022653 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra002888
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_19


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005092 GDP-dissociation inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007265 Ras protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007266 Rho protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002562 3'-5'_exonuclease_dom 83 157
IPR002562 3'-5'_exonuclease_dom 159 220
IPR002121 HRDC_dom 264 304
No external refs found!