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  5. Bra028806

Bra028806 (PP1R3)


Aliases : PP1R3

Description : regulatory component *(PP1R) of PP1 phosphatase


Gene families : OG0001113 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra028806
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_192


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005849 mRNA cleavage factor complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006308 DNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006378 mRNA polyadenylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009415 response to water IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 227 266
IPR001611 Leu-rich_rpt 65 87
No external refs found!