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  5. Bra028570

Bra028570


Description : clade F phosphatase


Gene families : OG0004304 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra028570
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_119


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005484 SNAP receptor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005488 binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016854 racemase and epimerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990316 Atg1/ULK1 kinase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 62 272
No external refs found!