Bra028437 (CDF2)

Aliases : CDF2

Description : transcription factor *(DOF)

Gene families : OG0011861 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra028437
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_141

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bra025655	CDF2	transcription factor *(DOF)	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0010181	FMN binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015996	chlorophyll catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019439	aromatic compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033015	tetrapyrrole catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046149	pigment catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0047746	chlorophyllase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0051213	dioxygenase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	114	171

External Links

No external refs found!

Bra028437 (CDF2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation