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Aliases : UPL2
Description : not classified
Gene families : OG0008456 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra027853 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_119 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008716 | D-alanine-D-alanine ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044248 | cellular catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048519 | negative regulation of biological process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010309 | E3_Ub_ligase_DUF908 | 110 | 411 |
| No external refs found! |