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  5. Bra027467

Bra027467 (CTL06)


Aliases : CTL06

Description : RING-H2-class CTL-subclass E3 ubiquitin ligase


Gene families : OG0007621 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra027467
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Bra014043 CTL05 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004806 triglyceride lipase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022839 monoatomic ion gated channel activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 356 397
No external refs found!