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Description : not classified
Gene families : OG0006279 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra027308 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_117 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_9_100501.1 | No alias | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003924 | GTPase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004057 | arginyl-tRNA--protein transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004652 | obsolete polynucleotide adenylyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005543 | phospholipid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006465 | signal peptide processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008289 | lipid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016197 | endosomal transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016482 | cytosolic transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016598 | protein arginylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016740 | transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016746 | acyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019538 | protein metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019786 | protein-phosphatidylethanolamide deconjugating activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030906 | retromer, cargo-selective complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030975 | thiamine binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032266 | phosphatidylinositol-3-phosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0036211 | protein modification process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043130 | ubiquitin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043178 | alcohol binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043412 | macromolecule modification | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043631 | obsolete RNA polyadenylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |