Bra026221 (AT59)

Aliases : AT59

Description : EC_4.2 carbon-oxygen lyase. pectate lyase

Gene families : OG0007474 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra026221
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_327

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	None	Extended
MF	GO:0030570	pectate lyase activity	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
CC	GO:0005875	microtubule associated complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016307	obsolete phosphatidylinositol phosphate kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030286	dynein complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007524	Pec_lyase_N	30	85
IPR002022	Pec_lyase	186	369

External Links

No external refs found!