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  5. Bra026203

Bra026203 (BLJ)


Aliases : BLJ

Description : C2H2 subclass IDD transcription factor


Gene families : OG0000411 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000411_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra026203
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_5_35960.1 IDD5, RVN, AtIDD5 C2H2 subclass IDD transcription factor 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Brassica rapa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!