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  5. Bra026106

Bra026106 (MED15_1, NRB4, AtMed15a)


Aliases : MED15_1, NRB4, AtMed15a

Description : not classified


Gene families : OG0000761 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000761_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra026106
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_274


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007062 sister chromatid cohesion IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007064 mitotic sister chromatid cohesion IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031047 regulatory ncRNA-mediated gene silencing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048364 root development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048731 system development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Brassica rapa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0110154 RNA decapping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0110156 methylguanosine-cap decapping IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990316 Atg1/ULK1 kinase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036546 MED15_KIX 360 415
IPR036546 MED15_KIX 1147 1218
IPR036546 MED15_KIX 498 553
IPR036546 MED15_KIX 572 597
No external refs found!