Bra025775 (IAA24, MP, ARF5)


Aliases : IAA24, MP, ARF5

Description : ARF-type transcription factor


Gene families : OG0002159 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra025775
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_215


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004017 adenylate kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016872 intramolecular lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
BP GO:0017038 protein import IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050145 nucleoside monophosphate kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR010525 ARF_dom 278 352
IPR003340 B3_DNA-bd 152 253
IPR033389 AUX/IAA_dom 404 445
No external refs found!