Bra025741

Description : not classified

Gene families : OG0012798 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra025741
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_134

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006284	base-excision repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004860	protein kinase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005685	U1 snRNP	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006354	DNA-templated transcription elongation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006376	mRNA splice site recognition	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0008023	transcription elongation factor complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0016593	Cdc73/Paf1 complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019210	kinase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022618	protein-RNA complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0032182	ubiquitin-like protein binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043130	ubiquitin binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071826	protein-RNA complex organization	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0097525	spliceosomal snRNP complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003265	HhH-GPD_domain	144	287

External Links

No external refs found!

Bra025741

Expression Profile

Co-expression Networks

Functional Annotation