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  5. Bra002528

Bra002528 (ZAT12, RHL41, AtZAT12)


Aliases : ZAT12, RHL41, AtZAT12

Description : C2H2-type subclass ZAT transcription factor


Gene families : OG0002018 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra002528
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Bra018225 No alias C2H2-type subclass ZAT transcription factor 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra020284 ZAT12, RHL41, AtZAT12 C2H2-type subclass ZAT transcription factor 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005216 monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005758 mitochondrial intermembrane space IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006955 immune response IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008146 sulfotransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016530 metallochaperone activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016531 copper chaperone activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031970 organelle envelope lumen IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045087 innate immune response IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Brassica rapa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!