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  5. Bra025163

Bra025163 (TPS-CIN, ATTPS-CIN, TPS27)


Aliases : TPS-CIN, ATTPS-CIN, TPS27

Description : mono-/sesquiterpene-/diterpene synthase. EC_4.2 carbon-oxygen lyase


Gene families : OG0004615 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004615_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra025163
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_12


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008146 sulfotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 25 205
IPR005630 Terpene_synthase_metal-bd 236 502
No external refs found!