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  5. Bra024797

Bra024797


Description : E3 ubiquitin ligase


Gene families : OG0007636 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra024797
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_54


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022143 DUF3675 118 236
IPR011016 Znf_RING-CH 67 112
No external refs found!