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  5. Bra024253

Bra024253 (EMB2780, GIS5)


Aliases : EMB2780, GIS5

Description : component *(POLD1) of DNA polymerase delta complex. EC_2.7 transferase transferring phosphorus-containing group


Gene families : OG0007691 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra024253
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_244


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005839 proteasome core complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006134 DNA-dir_DNA_pol_B_multi_dom 564 996
IPR006133 DNA-dir_DNA_pol_B_exonuc 125 402
IPR006133 DNA-dir_DNA_pol_B_exonuc 431 500
IPR025687 Znf-C4pol 1034 1131
No external refs found!