Bra023617 (PLT4, BBM)

Aliases : PLT4, BBM

Description : AP2-type transcription factor *(WRI/AIL)

Gene families : OG0011763 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra023617
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_96

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004096	catalase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006576	biogenic amine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006595	polyamine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006596	polyamine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006597	spermine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008215	spermine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008216	spermidine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008295	spermidine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030259	lipid glycosylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0031124	mRNA 3'-end processing	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042401	biogenic amine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0120009	intermembrane lipid transfer	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0120013	lipid transfer activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	278	328

External Links

No external refs found!

Bra023617 (PLT4, BBM)

Expression Profile

Co-expression Networks

Functional Annotation