Bra023133 (SUC9, ATSUC9)

Aliases : SUC9, ATSUC9

Description : not classified

Gene families : OG0028462 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra023133
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_66

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	RNA endonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	RNA nuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008430	selenium binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030570	pectate lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002156	RNaseH_domain	8	63

External Links

No external refs found!

Bra023133 (SUC9, ATSUC9)

Expression Profile

Co-expression Networks

Functional Annotation