Bra022780 (PCK1, ASL5, LBD12)


Aliases : PCK1, ASL5, LBD12

Description : AS2/LOB-type transcription factor


Gene families : OG0002656 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002656_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra022780
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_158


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004866 endopeptidase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005985 sucrose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008200 ion channel inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016157 sucrose synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016247 channel regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016248 channel inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017080 sodium channel regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019871 sodium channel inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030414 peptidase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051920 peroxiredoxin activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061134 peptidase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0099106 ion channel regulator activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004883 LOB 8 105
No external refs found!