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  5. Bra002266

Bra002266


Description : not classified


Gene families : OG0012072 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra002266
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_141


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004061 arylformamidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004549 tRNA-specific ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006568 tryptophan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006569 tryptophan catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006586 indolalkylamine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009063 amino acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009074 aromatic amino acid family catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016892 RNA endonuclease activity, producing 3'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042436 indole-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042537 benzene-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070189 kynurenine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007493 DUF538 38 145
No external refs found!