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  5. Bra022438

Bra022438


Description : not classified


Gene families : OG0006105 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra022438
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_54


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0110154 RNA decapping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0110156 methylguanosine-cap decapping IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006652 Kelch_1 164 196
IPR001810 F-box_dom 18 59
No external refs found!